Norwegian Sarcoma Consortium Tumor-Normal pairs Whole Exome Sequencing dataset 2026

The dataset consists of Whole Exome Sequencing results from 287 sarcoma patients in the NoSarC cohort, from which matched sarcoma tumor samples and normal blood samples were pairwise analysed together using the Dragen v.3.7 analysis framework. The dataset contains fastq files as used for input to the analysis and the Dragen 3.7 vcfs outputs for germline mutations, somatic mutations and copy number variants (and their corresponding index files). The phenotype information provided includes: age, sex, times of birth, surgery, death, last followup or last known alive, local recurrence assessment, metastatic-free survival assessment and recurrence-free survival assessment. All times provided in a month-year format. 8 disease and topography fields such as disease status at inclusion, time of WES tumor sampling and final histological diagnosis, as well as tumor lesion sampled and localization of the sarcoma in final diagnosis, are included, as well as 5 outcome-related variables including overall survival and cause of death. Finally 5 treatment-related variables are included.

Data and Resources

Additional Info

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Title Norwegian Sarcoma Consortium Tumor-Normal pairs Whole Exome Sequencing dataset 2026
Description

The dataset consists of Whole Exome Sequencing results from 287 sarcoma patients in the NoSarC cohort, from which matched sarcoma tumor samples and normal blood samples were pairwise analysed together using the Dragen v.3.7 analysis framework. The dataset contains fastq files as used for input to the analysis and the Dragen 3.7 vcfs outputs for germline mutations, somatic mutations and copy number variants (and their corresponding index files). The phenotype information provided includes: age, sex, times of birth, surgery, death, last followup or last known alive, local recurrence assessment, metastatic-free survival assessment and recurrence-free survival assessment. All times provided in a month-year format. 8 disease and topography fields such as disease status at inclusion, time of WES tumor sampling and final histological diagnosis, as well as tumor lesion sampled and localization of the sarcoma in final diagnosis, are included, as well as 5 outcome-related variables including overall survival and cause of death. Finally 5 treatment-related variables are included.
Keywords
Contact points
Contact point 1
URI
Name
Eivind Hovig
Name (translations)
Email
ehovig@ifi.uio.no
Identifier
https://orcid.org/0000-0002-9103-1077
URL
    Publisher
    Publisher 1
    URI
    Name
    University of Oslo
    Name (translations)
    Email
    URL
    Type
    Publisher note
    Publisher type
    Identifier
    https://www.uio.no/english/index.html
    Creator
    Creator 1
    URI
    Name
    Eivind Hovig
    Name (translations)
    Email
    URL
    Type
    Publisher note
    Publisher type
    Identifier
    https://orcid.org/0000-0002-9103-1077
    Landing page
    Release date 2026-09-28T00:00:00+00:00
    Modification date 2026-09-30T12:06:05+00:00
    In Series
      Version
      Version notes

      Initial metadata version for the Norwegian GDI catalog.
      Identifier GDI-NO-UIO-001
      Frequency
      Provenance

      Created and maintained by University of Oslo.
      Type
      Temporal coverage
      Temporal resolution
      Spatial coverage
      Spatial resolution in meters
      Access rights http://publications.europa.eu/resource/authority/access-right/RESTRICTED
      Other identifier
      Theme
      1. http://publications.europa.eu/resource/authority/data-theme/HEAL
      Language
      Documentation
      Conforms to
      1. http://data.gdi.eu/core/p2/ExternallyGoverned
      Is referenced by
      Distribution
      1. http://gdi-norway.onemilliongenomes.eu/dataset/GDI-NO-UIO-001/distribution/1
      Sample
      Analytics
      Applicable legislation
      Has version
      Code values
      Coding system
      Purpose
      Health category
      1. http://data.gdi.eu/core/p2/HealthCategoryHumanGenetic
      Health theme
      Legal basis
      Minimum typical age
      Maximum typical age
      Number of records
      Number of records for unique individuals.
      Personal data
      Publisher note
      Publisher type
      Trusted Data Holder
      Population coverage
      Retention period
      Health data access body
      Qualified relation
      Provenance activity
      Qualified attribution
      Quality annotations
      URI http://gdi-norway.onemilliongenomes.eu/dataset/GDI-NO-UIO-001